Table of contents for Differential display methods and protocols / edited by Peng Liang, Jonathan D. Meade, Arthur B. Pardee.

Bibliographic record and links to related information available from the Library of Congress catalog.

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Contents
Preface	v
Contributors	xi
PART I. METHODOLOGIES
	1	Global Analysis of Gene Expression by Differential Display: 		A 
Mathematical 
Model
Shitao Yang and Peng Liang	XXX
	2	Automation of Fluorescent Differential Display 				With 
Digital 
Readout 
Jonathan D. Meade, Yong-jig Cho, Jeffrey S. Fisher, Jamie C. 
Walden, 
Zhen Guo, and Peng Liang	XXX
	3	Ordered Differential Display (ODD)
Mikhail V. Matz and Ella A. Meleshkevitch	XXX
	4	GeneCalling(tm): Transcript Profiling Coupled to a Gene 
Database Query
Richard A. Shimkets	XXX
	5	High Density Sampling Differential Display of Prokaryotic 		mRNAs 
With 
RAP-PCR
Dana M. Walters and Pierre E. Rouviere	XXX
	6	Vertical Arrays: Microarrays of Complex Mixtures 				of 
Nucleic Acids
Rosana Risques, Gaelle Rondeau, Martin Judex, Michael 
McClelland, 
and John Welsh	XXX
	7	Automated Pattern Ranking in Differential Display Data Analysis
Tero Aittokallio, Pekka Ojala, Timo J. Nevalainen, and 
Olli S. 
Nevalainen	XXX
	8	Linking cDNA-AFLP-Based Gene Expression Patterns and ESTs
Ling Qin, Pjotr Prins, and Johannes Helder	XXX
PART II. APPLICATIONS	
	9	Differentially Expressed Genes Associated With Hepatitis B Virus HBx and 
MHBs Protein 
Function in Hepatocellular Carcinoma
Dae-Ghon Kim	XXX
10	Identification of Disease Markers by Differential Display:			Prion 
Disease
Michael Clinton, Gino Miele, Sunil Nandi, 
and Derek 
McBride	XXX
	11	Saturation Screening for p53 Target Genes by Digital 
Fluorescent Differential 
Display
Yong-Jig Cho, Susanne Stein, Roger S. Jackson II, 
and Peng Liang
	XXX
	12	Identification of p53-Regulated Genes by the Method 
of Differential 
Display
Yunping Lin, Roger P. Leng, and Samuel Benchimol	XXX
	13	Identification by Differential Display of IL-24 Autocrine 
Loop Activated by 
Ras Oncogenes
Zhongjia Tan, Mai Wang, and Peng Liang	XXX
	14	Comprehensive Analysis of Ovarian Gene Expression 
During Ovulation 
Using Differential Display
Lawrence Espey	XXX
	15	Functional Analysis of Nocturnin: A Circadian Clock 
Regulated Gene 
Identified by Differential Display
Julie E. Baggs and Carla B. Green	XXX
	16	Isolation and Characterization of Anthocyanin 
5-O-
Glucosyltransferase in Perilla Frutescens Var. 
Crispa by Differential 
Display
Mami Yamasaki and Kazuki Saito	XXX
	17	Identification of Target Genes of a Yeast 
Transcriptional Repressor
Bernard Mai and Linda L. Breeden	XXX
	18	Detection of an mRNA Polymorphism by Differential Display
Shan Liang, S. Paul Rossby, Peng Liang, Richard C. Shelton, D. Hal 
Manier, 
Amitabha Chakrabarti, and Fridolin Sulser	XXX
	19	Silencing in Yeast: Identification of Clr4 Targets
Sergey V. Ivanov and Alla V. Ivanova	XXX
	20	Identification of mRNA Bound to RNA Binding 
Proteins by 
Differential Display
Anne Carr-Schmid, Xinfu Jiao, and Megerditch Kiledjian	XXX

Library of Congress Subject Headings for this publication:

Messenger RNA -- Laboratory manuals.
Gene expression -- Research -- Methodology.
Polymerase chain reaction.
DNA fingerprinting.
Gene Expression Profiling -- methods -- Laboratory Manuals.
Gene Expression -- physiology -- Laboratory Manuals.
Molecular Biology -- methods -- Laboratory Manuals.
Oligonucleotide Array Sequence Analysis -- methods -- Laboratory Manuals.